Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022858.1 Corchorus olitorius cultivar O-4 contig22891, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8042

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
712--1027
50
6.3
50
96
0
551
26
12
30
29
1.93
1549--1698
50
3.0
50
92
1
239
38
14
14
32
1.86
2293--2335
6
7.5
6
80
19
56
16
0
13
69
1.19
2293--2358
5
12.6
5
77
16
55
16
1
15
66
1.32
2293--2329
11
3.1
13
85
14
53
16
0
13
70
1.17
2293--2336
18
2.6
17
85
7
63
15
0
13
70
1.17
2298--2353
18
3.0
19
82
14
64
16
1
14
67
1.31
2293--2360
23
3.0
22
91
6
100
16
1
14
67
1.30
2293--2366
18
3.9
18
73
21
62
16
2
14
66
1.37
3158--3306
76
2.0
76
82
5
185
31
20
12
35
1.90
4817--4858
21
2.0
22
90
4
68
33
9
30
26
1.88

Tables:   1

The End!