Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022890.1 Corchorus olitorius cultivar O-4 contig22923, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7654

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
538--579
15
2.7
15
92
3
66
11
9
14
64
1.50
3194--3251
31
1.9
30
86
6
82
31
13
29
25
1.94
3980--4015
16
2.2
17
90
9
58
63
16
0
19
1.30
3960--4053
48
2.0
48
89
4
145
56
23
0
20
1.42
4133--4254
42
2.9
42
100
0
244
43
22
9
25
1.82

Tables:   1

The End!