Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022903.1 Corchorus olitorius cultivar O-4 contig22936, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13581

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1431--1466
15
2.5
15
90
4
56
38
13
8
38
1.75
4206--4526
41
7.8
41
81
5
319
38
21
25
14
1.91
4206--4522
82
3.9
82
83
3
361
39
21
25
13
1.90
5467--5506
4
10.2
4
83
5
55
70
0
5
25
1.08
6838--7454
54
11.4
54
80
7
617
31
21
18
28
1.97
7306--7731
145
2.8
147
78
10
376
31
21
19
28
1.97
7474--7902
54
7.8
53
80
7
435
32
21
18
27
1.97
7273--7648
199
1.9
201
85
1
522
32
20
18
28
1.96
7660--7889
119
1.9
118
95
0
415
30
22
19
27
1.98
7998--8100
54
1.9
54
89
0
161
37
24
15
22
1.93

Tables:   1

The End!