Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022905.1 Corchorus olitorius cultivar O-4 contig22938, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22219

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
646--750
28
3.8
28
83
3
122
37
22
16
23
1.94
5637--5673
19
2.0
18
89
5
56
32
21
5
40
1.76
7837--7909
26
2.7
27
87
2
103
46
30
6
16
1.73
18430--18475
11
4.1
11
88
5
74
36
13
41
8
1.75
18432--18476
23
2.0
23
100
0
90
35
15
40
8
1.79
18795--18907
21
5.4
21
93
2
167
26
26
17
29
1.98
19013--20168
154
7.5
154
92
1
1859
40
19
18
21
1.92

Tables:   1

The End!