Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022906.1 Corchorus olitorius cultivar O-4 contig22939, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14765

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3720--3751
15
2.1
15
100
0
64
50
28
6
15
1.68
4337--4462
66
1.9
65
83
4
164
26
8
23
42
1.83
4368--4510
33
4.3
32
77
7
126
28
8
20
42
1.81
7937--7974
20
1.9
20
88
0
58
34
18
21
26
1.96
12992--13024
16
2.1
16
94
0
57
24
6
21
48
1.72
13076--13128
17
3.1
16
77
20
54
32
5
20
41
1.76
13073--13136
19
3.6
18
77
16
62
28
6
21
43
1.77
13094--13144
19
2.7
19
79
11
59
27
3
23
45
1.70

Tables:   1

The End!