Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022907.1 Corchorus olitorius cultivar O-4 contig22940, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38629

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1308--1351
21
2.1
21
82
0
52
9
9
4
77
1.12
2477--2525
21
2.3
21
82
6
55
40
16
28
14
1.87
17983--18017
3
11.7
3
87
0
52
62
0
5
31
1.18
25092--25121
15
2.0
15
100
0
60
40
13
20
26
1.89
27022--27156
34
4.1
34
74
13
138
54
5
14
25
1.60
27038--27156
34
3.6
34
73
13
140
56
5
14
24
1.58
27579--27617
2
19.5
2
100
0
78
48
0
0
51
1.00
27615--27705
4
22.8
4
100
0
182
25
0
24
50
1.49

Tables:   1

The End!