Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022910.1 Corchorus olitorius cultivar O-4 contig22943, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25725

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5457--5511
28
2.0
28
100
0
110
32
32
3
30
1.75
6390--6430
21
2.0
20
85
4
55
41
2
2
53
1.27
7221--7246
12
2.2
12
100
0
52
53
0
30
15
1.42
11856--11894
10
3.9
10
89
0
60
0
0
15
84
0.62
12593--12906
66
4.8
66
82
3
341
22
27
32
17
1.96
12572--12906
131
2.5
130
79
4
370
21
28
31
18
1.97
12911--13129
37
5.8
37
73
16
153
12
27
39
20
1.89
12946--13251
117
2.6
117
88
2
438
14
29
37
19
1.91
13583--13742
56
2.8
55
80
10
173
18
21
29
30
1.97
14105--14395
100
2.9
100
87
4
408
21
23
31
23
1.99
14100--14395
101
2.9
99
84
7
391
21
23
31
23
1.99
22406--22449
21
2.1
21
95
0
79
40
18
20
20
1.91
24975--25051
29
2.7
29
87
2
102
19
12
24
42
1.86

Tables:   1

The End!