Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022911.1 Corchorus olitorius cultivar O-4 contig22944, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9992

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5227--5279
27
2.0
27
88
0
79
45
13
20
20
1.84
5984--6267
109
2.6
107
78
8
288
19
22
18
39
1.92
5972--6519
35
15.5
36
76
5
395
19
21
18
40
1.91
5985--6337
71
4.9
73
75
8
194
18
22
18
39
1.93
6376--6476
31
3.1
31
75
12
94
17
16
20
44
1.87
6327--6515
102
1.9
101
81
6
229
19
18
16
44
1.86
6773--7739
30
32.2
30
90
1
1303
20
13
18
47
1.82
8172--8248
29
2.7
29
89
2
111
16
14
25
42
1.86
8548--8573
10
2.6
10
100
0
52
69
11
7
11
1.37

Tables:   1

The End!