Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022914.1 Corchorus olitorius cultivar O-4 contig22947, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28387

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
256--302
23
2.0
23
95
0
85
27
23
12
36
1.91
5024--5088
28
2.3
27
74
10
67
40
15
3
41
1.63
5414--5458
17
2.3
20
71
25
51
35
15
13
35
1.87
13754--13854
21
4.8
21
93
2
168
28
19
25
25
1.99
17969--18002
17
2.0
17
94
0
59
50
23
5
20
1.70
18417--18492
39
1.9
39
86
0
107
48
14
13
23
1.79
18776--19124
69
5.1
69
90
1
529
27
17
30
24
1.97
20620--20745
50
2.5
50
90
2
200
34
14
18
33
1.91
22262--22305
21
2.1
21
86
0
61
15
22
31
29
1.95

Tables:   1

The End!