Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022921.1 Corchorus olitorius cultivar O-4 contig22954, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41955

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7126--7159
9
3.6
9
92
8
50
44
0
0
55
0.99
28167--28213
18
2.7
17
83
6
58
0
12
4
82
0.80
28433--28499
32
2.1
32
85
0
89
28
20
17
32
1.96
28453--28515
32
2.0
32
83
0
81
30
19
15
34
1.93
32597--32636
17
2.4
17
100
0
80
57
10
0
32
1.32
32654--32696
15
2.9
14
83
10
50
41
2
0
55
1.12
32648--32696
21
2.5
21
87
9
68
38
4
0
57
1.18
34192--34265
28
2.7
27
74
15
71
40
10
22
25
1.87

Tables:   1

The End!