Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022927.1 Corchorus olitorius cultivar O-4 contig22960, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17733

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
805--845
6
6.7
6
94
2
64
48
0
12
39
1.41
5178--5221
5
8.8
5
90
9
72
56
0
0
43
0.99
6773--6887
44
2.6
44
100
0
230
13
35
9
40
1.78
9722--9751
7
4.1
7
91
8
51
13
0
43
43
1.43
14094--14154
23
2.7
23
85
7
72
13
3
24
59
1.49
15635--15676
19
2.2
19
87
8
59
52
9
4
33
1.55
15833--15902
30
2.4
29
85
2
86
22
8
27
41
1.83

Tables:   1

The End!