Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022932.1 Corchorus olitorius cultivar O-4 contig22965, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12546

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1497--1773
134
2.0
134
87
2
392
49
5
16
28
1.68
1641--1700
30
2.0
30
90
0
93
46
5
16
31
1.69
1771--1798
5
5.6
5
100
0
56
82
0
0
17
0.68
4072--4123
2
27.5
2
81
18
67
51
1
0
46
1.12
4072--4123
17
3.1
17
86
10
79
51
1
0
46
1.12
4072--4123
15
3.1
18
78
21
67
51
1
0
46
1.12
5148--5176
14
2.1
14
100
0
58
27
13
6
51
1.66
12393--12444
26
2.0
26
100
0
104
26
30
11
30
1.92

Tables:   1

The End!