Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022933.1 Corchorus olitorius cultivar O-4 contig22966, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66434

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5938--5966
12
2.4
12
100
0
58
93
6
0
0
0.36
8883--8923
20
2.0
20
90
9
66
58
0
4
36
1.20
8877--8924
20
2.3
21
80
20
64
52
0
6
41
1.27
14566--15459
435
2.1
437
87
3
1275
30
14
13
41
1.84
17728--17762
14
2.5
14
100
0
70
14
34
37
14
1.86
28919--29021
54
1.9
54
93
0
179
33
23
18
24
1.96
37090--37159
33
2.1
33
89
0
104
15
31
35
17
1.91
42026--42074
20
2.5
20
83
3
64
46
2
4
46
1.33
45550--45592
19
2.4
18
84
7
61
69
0
27
2
1.00
46696--47705
436
2.3
434
84
5
1271
29
14
12
43
1.82
56375--56498
61
2.0
61
93
0
212
28
17
10
43
1.82

Tables:   1

The End!