Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022935.1 Corchorus olitorius cultivar O-4 contig22968, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18350

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3009--3065
17
3.4
17
70
18
55
61
3
1
33
1.23
4565--5181
310
2.0
307
88
4
909
29
12
16
42
1.84
5181--5315
70
1.9
70
92
0
225
43
18
17
20
1.88
5542--5616
35
2.1
35
100
0
150
24
17
17
41
1.90
5658--5689
16
2.0
16
93
0
55
53
0
0
46
1.00
5642--5689
19
2.5
19
83
10
62
47
0
0
52
1.00
5829--5863
18
1.9
18
94
0
61
28
8
11
51
1.67
6533--7558
436
2.3
435
83
5
1257
31
14
11
42
1.82
10268--10306
15
2.6
15
83
0
51
51
5
35
7
1.53

Tables:   1

The End!