Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022936.1 Corchorus olitorius cultivar O-4 contig22969, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44403

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10259--10300
20
2.2
20
91
4
68
64
0
0
35
0.94
11468--11770
153
2.0
151
89
5
468
34
9
3
52
1.50
21429--21557
3
43.0
3
100
0
258
66
0
0
33
0.92
22716--22782
21
3.2
21
68
16
66
52
14
4
28
1.62
22703--22783
42
1.9
42
94
0
144
48
16
6
29
1.70
22851--23011
56
2.8
56
95
1
286
40
1
22
34
1.65
26202--26241
15
2.6
16
88
4
55
15
10
12
62
1.54
28422--28511
41
2.2
41
86
4
128
52
7
10
30
1.63
31336--31497
29
5.7
29
79
2
159
41
22
17
18
1.90
37678--37717
15
2.6
16
88
4
55
62
12
10
15
1.54
38060--39019
343
2.8
343
95
1
1739
39
15
20
23
1.91
41983--42033
21
2.4
21
80
6
59
27
31
25
15
1.96

Tables:   1

The End!