Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022937.1 Corchorus olitorius cultivar O-4 contig22970, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19909

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8901--8966
7
9.4
7
74
12
55
42
27
27
3
1.70
8905--8942
20
1.9
20
100
0
76
39
26
31
2
1.70
8901--8966
27
2.4
28
87
5
89
42
27
27
3
1.70
8931--8975
22
2.0
22
86
0
63
40
26
28
4
1.75
9301--9354
19
2.7
20
86
8
83
25
18
40
14
1.89
9301--9354
21
2.7
20
88
5
83
25
18
40
14
1.89
10033--10463
226
1.9
219
82
10
526
44
9
13
32
1.75
11814--11842
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!