Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022938.1 Corchorus olitorius cultivar O-4 contig22971, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31357

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10890--10990
8
11.9
8
69
25
57
31
0
0
67
0.98
10909--10988
18
4.6
18
70
22
71
35
0
0
65
0.93
10901--11007
26
4.1
26
97
0
196
36
0
0
62
1.02
11304--11338
18
1.9
18
94
0
61
51
11
8
28
1.67
11536--11610
35
2.1
35
97
0
141
41
18
18
21
1.91
18252--18288
19
2.0
19
89
5
58
56
10
10
21
1.64
21503--21647
50
3.0
49
79
8
161
51
5
14
28
1.64
22927--22964
9
4.3
9
83
3
51
31
18
2
47
1.62
29930--30071
49
3.0
49
84
9
161
52
6
12
28
1.63

Tables:   1

The End!