Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022943.1 Corchorus olitorius cultivar O-4 contig22976, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17840

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2400--2450
27
1.9
27
84
4
68
27
13
9
49
1.74
2522--2557
2
18.0
2
100
0
72
50
0
0
50
1.00
3024--3064
2
20.5
2
94
0
73
48
2
48
0
1.14
7224--7276
26
2.0
26
88
0
79
11
22
15
50
1.75
14892--14922
7
4.4
7
100
0
62
32
0
25
41
1.56
15138--15162
8
3.1
8
100
0
50
24
0
64
12
1.27
16955--17018
17
3.2
21
68
20
64
50
9
3
37
1.51
16943--17023
39
2.0
40
95
2
146
50
7
3
38
1.48
17014--17060
25
1.9
25
95
4
87
29
6
8
55
1.55

Tables:   1

The End!