Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022968.1 Corchorus olitorius cultivar O-4 contig23001, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34911

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1321--1351
2
15.5
2
100
0
62
51
0
0
48
1.00
1424--1593
22
7.8
22
73
9
102
36
14
9
39
1.79
1469--1595
21
5.9
21
73
15
82
35
14
10
39
1.81
1469--1582
44
2.6
44
77
9
119
36
14
10
37
1.81
1549--1629
21
3.9
20
76
13
76
24
18
9
46
1.79
1883--1966
42
2.0
42
83
0
105
30
25
9
34
1.88
6906--6938
2
16.5
2
93
0
57
51
0
3
45
1.16
10025--10105
30
2.7
31
78
17
91
34
0
37
28
1.58
15066--15261
108
1.8
109
90
1
322
42
21
14
21
1.88
23294--23322
2
14.5
2
100
0
58
51
0
0
48
1.00
30498--30532
11
3.2
11
83
0
52
77
17
5
0
0.96
33407--33680
107
2.6
107
88
1
408
42
8
10
38
1.70
34642--34719
29
2.7
29
79
2
93
50
16
16
16
1.79

Tables:   1

The End!