Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022976.1 Corchorus olitorius cultivar O-4 contig23009, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33167

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
998--1055
28
2.1
28
90
0
89
32
31
20
15
1.94
2267--2296
10
3.0
10
95
0
51
36
0
33
30
1.58
2817--3325
168
3.0
168
86
3
670
33
7
23
34
1.84
3422--3451
12
2.5
12
94
0
51
36
0
40
23
1.55
9911--9935
8
3.1
8
100
0
50
88
0
0
12
0.53
13486--13553
34
2.0
34
91
0
109
29
17
30
22
1.97
22066--22103
11
3.5
11
89
10
51
39
0
2
57
1.12
25090--25114
11
2.3
11
100
0
50
36
0
16
48
1.46
27538--27572
2
17.5
2
100
0
70
48
0
0
51
1.00
28331--28366
2
18.0
2
94
0
63
50
2
0
47
1.15

Tables:   1

The End!