Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022988.1 Corchorus olitorius cultivar O-4 contig23021, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11124

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37--62
1
26.0
1
100
0
52
100
0
0
0
0.00
4647--4681
18
1.9
18
100
0
70
22
17
17
42
1.88
7318--7380
31
2.0
31
93
0
108
34
14
12
38
1.84
7395--7443
9
5.8
9
79
13
59
71
0
0
28
0.86
7396--7444
17
3.0
16
85
5
71
73
0
0
26
0.83
7394--7455
28
2.3
27
86
10
83
69
0
0
30
0.89
8901--8926
12
2.2
12
100
0
52
50
0
0
50
1.00
11097--11122
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!