Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022990.1 Corchorus olitorius cultivar O-4 contig23023, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13798

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
135--180
17
2.9
16
90
6
67
8
30
0
60
1.26
121--184
16
4.0
16
84
9
78
9
35
0
54
1.33
4956--4998
18
2.4
18
88
7
61
32
13
25
27
1.94
7034--7298
132
2.0
131
97
0
503
21
4
27
47
1.69
7370--7699
165
2.0
164
94
1
581
43
11
13
32
1.80
8380--8423
19
2.4
18
85
7
61
52
0
0
47
1.00
11304--11471
53
3.3
52
66
25
144
33
16
12
37
1.86
11298--11494
97
2.0
97
98
0
376
35
16
11
37
1.84
11636--11696
31
2.0
31
96
0
113
40
8
9
40
1.68
11740--11802
26
2.4
26
100
0
126
46
17
12
23
1.83

Tables:   1

The End!