Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022991.1 Corchorus olitorius cultivar O-4 contig23024, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59918

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9133--9425
147
2.0
147
98
0
568
37
15
25
21
1.92
9383--9619
117
2.0
117
84
3
307
35
18
28
17
1.94
11377--11412
2
18.0
2
100
0
72
0
0
50
50
1.00
17160--17229
28
2.5
28
100
0
140
21
14
30
34
1.93
26704--26745
1
42.0
1
100
0
84
0
0
0
100
0.00
26820--26870
26
2.0
26
88
7
77
25
9
27
37
1.87
27060--27121
31
2.0
31
93
0
106
29
22
6
41
1.78
27120--27296
93
1.9
93
89
4
277
33
12
1
51
1.50
29777--29911
63
2.1
63
81
5
157
33
8
30
28
1.86
30342--30374
16
2.0
17
88
5
50
63
6
18
12
1.48
40303--40391
45
2.0
45
95
0
160
20
14
24
40
1.90
41333--41405
36
2.0
36
94
0
128
23
19
28
28
1.98
41744--41810
34
2.0
34
90
0
107
40
26
11
20
1.88
41828--41863
15
2.2
16
90
9
56
50
27
13
8
1.71
42243--42284
20
2.2
19
91
4
66
64
19
2
14
1.39
48603--48641
18
2.1
19
85
4
53
33
25
2
38
1.70
49921--49977
26
2.2
26
100
0
114
38
22
10
28
1.87

Tables:   1

The End!