Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022996.1 Corchorus olitorius cultivar O-4 contig23029, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30701

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
333--434
51
2.0
50
83
9
127
21
22
13
42
1.88
2574--2648
33
2.3
33
100
0
150
42
26
9
21
1.83
2739--2794
13
4.4
13
76
10
53
62
5
1
30
1.28
7857--7917
30
2.0
31
96
3
115
29
6
9
54
1.59
8182--8263
9
8.8
9
72
15
60
51
3
2
42
1.32
8183--8265
30
3.0
27
83
10
112
49
3
3
43
1.37
12893--12957
26
2.4
27
82
7
69
50
9
4
35
1.55
13395--13454
30
2.1
30
87
9
90
30
8
10
51
1.64
21248--21278
8
3.9
8
95
0
53
6
25
3
64
1.33
25277--25306
3
10.0
3
92
0
51
63
0
0
36
0.95
26218--26259
21
2.0
21
100
0
84
42
14
19
23
1.87

Tables:   1

The End!