Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023005.1 Corchorus olitorius cultivar O-4 contig23038, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22975

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5247--5512
107
2.5
104
90
3
417
41
8
9
40
1.67
12082--12121
21
2.0
21
85
5
55
12
0
32
55
1.38
17440--17495
24
2.3
25
90
6
89
50
26
17
5
1.68
19398--19488
42
2.2
42
87
0
137
51
13
13
21
1.74
19725--19752
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!