Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023007.1 Corchorus olitorius cultivar O-4 contig23040, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33096

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4237--4276
19
2.1
19
100
0
80
42
10
22
25
1.84
4241--4286
19
2.6
18
89
6
67
43
10
19
26
1.84
8722--8761
19
2.1
19
100
0
80
42
10
22
25
1.84
8726--8771
19
2.6
18
89
6
67
43
10
19
26
1.84
21675--21714
15
2.6
16
92
4
64
12
10
12
65
1.49
24159--24186
9
3.1
9
100
0
56
10
14
21
53
1.70
26241--26282
21
2.0
21
90
0
66
33
28
7
30
1.84
32962--32988
14
1.9
14
100
0
54
70
0
0
29
0.88

Tables:   1

The End!