Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023015.1 Corchorus olitorius cultivar O-4 contig23048, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24576

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2460--2513
21
2.6
21
82
5
56
18
27
29
24
1.98
2447--2598
76
2.0
76
80
5
173
17
29
28
24
1.97
3088--3133
20
2.2
23
81
14
55
21
4
8
65
1.38
3357--3387
15
2.1
15
93
0
53
0
41
3
54
1.16
11518--11550
16
2.1
16
100
0
66
36
6
18
39
1.75
12141--12189
21
2.3
21
89
0
71
12
24
46
16
1.81
19556--19585
3
10.0
3
92
0
51
66
3
30
0
1.07
20802--20939
63
2.2
63
90
0
213
34
5
19
40
1.74
21757--21822
33
2.0
33
93
0
114
28
12
18
40
1.86

Tables:   1

The End!