Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023018.1 Corchorus olitorius cultivar O-4 contig23051, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37049

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12516--12565
19
2.6
19
90
6
75
16
32
14
38
1.88
12615--12673
21
3.0
19
82
5
64
33
18
10
37
1.85
12637--12673
19
1.9
19
88
0
56
32
18
10
37
1.86
12879--13005
65
2.0
65
91
0
209
31
16
25
25
1.96
19925--19950
12
2.2
12
100
0
52
15
15
26
42
1.87
22530--22580
20
2.5
21
84
6
61
31
5
3
58
1.40
24115--24204
46
2.0
46
90
0
144
18
15
16
48
1.81
27587--27691
52
2.0
52
94
3
185
29
18
20
31
1.96

Tables:   1

The End!