Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023019.1 Corchorus olitorius cultivar O-4 contig23052, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32902

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
248--371
4
31.5
4
79
3
117
45
4
4
45
1.43
248--371
6
21.0
6
80
3
117
45
4
4
45
1.43
1588--1621
17
2.0
17
88
0
50
20
11
17
50
1.77
9080--9132
28
1.9
28
85
11
74
20
7
11
60
1.55
9560--9610
24
2.1
25
89
10
79
19
3
3
72
1.16
19083--19147
18
3.8
18
76
12
64
18
6
26
49
1.71
20618--20653
18
2.0
18
100
0
72
44
11
16
27
1.82
21725--21759
2
17.5
2
100
0
70
48
0
0
51
1.00
29644--29676
8
4.2
8
88
3
50
51
0
48
0
1.00
32259--32392
68
2.0
68
96
0
250
27
13
39
19
1.89
32875--32902
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!