Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023021.1 Corchorus olitorius cultivar O-4 contig23054, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11434

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32--130
21
4.6
22
81
3
103
44
12
8
35
1.71
28--130
43
2.4
43
83
3
127
43
11
8
35
1.72
2678--2738
27
2.3
26
83
16
72
45
1
8
44
1.43
3741--3779
2
19.5
2
100
0
78
48
0
0
51
1.00
5441--5468
2
14.0
2
100
0
56
50
0
0
50
1.00
6376--6418
19
2.4
19
88
7
63
16
9
18
55
1.67
6995--7082
33
2.6
33
94
1
149
21
21
4
52
1.65
7025--7089
33
2.1
29
81
13
69
26
20
4
49
1.68

Tables:   1

The End!