Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023024.1 Corchorus olitorius cultivar O-4 contig23057, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22877

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
578--705
38
3.1
43
87
12
214
14
21
17
46
1.83
13221--13263
19
2.3
19
95
0
77
55
32
0
11
1.36
14469--14501
13
2.4
14
85
5
50
72
6
3
18
1.18
16479--16535
28
2.0
28
96
0
105
31
5
14
49
1.65
16969--17027
3
19.7
3
100
0
118
66
0
0
33
0.92
17209--17244
12
3.2
12
84
15
58
77
0
0
22
0.76
17210--17252
22
2.0
21
90
4
68
76
0
2
20
0.89
17203--17240
13
2.9
13
80
11
51
78
0
0
21
0.74
18583--18714
66
2.0
66
88
2
194
17
25
29
27
1.97
19769--19819
24
2.1
24
88
0
75
41
23
1
33
1.66
20285--20310
13
2.0
13
100
0
52
61
0
23
15
1.33
21471--21529
30
1.9
31
83
16
79
38
8
10
42
1.69
21671--21715
2
22.5
2
100
0
90
48
0
0
51
1.00
22788--22824
2
18.5
2
100
0
74
51
0
0
48
1.00

Tables:   1

The End!