Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023031.1 Corchorus olitorius cultivar O-4 contig23064, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11422

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
118--147
15
2.1
15
93
6
53
66
0
0
33
0.92
1304--1353
26
1.9
26
100
0
100
66
6
8
20
1.40
1489--1554
21
3.1
21
71
18
57
71
6
4
18
1.24
5003--5048
22
2.1
22
88
8
67
23
23
21
30
1.99

Tables:   1

The End!