Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023033.1 Corchorus olitorius cultivar O-4 contig23066, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26401

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43--133
25
3.6
25
90
0
137
28
27
20
23
1.99
3279--3358
6
12.7
6
80
15
74
68
0
28
2
1.02
18165--18222
19
2.9
19
82
5
62
36
8
22
32
1.85
22622--22685
31
2.1
31
90
0
101
34
26
18
20
1.96
22989--23204
44
4.9
44
88
3
310
37
10
0
51
1.40
22969--23160
13
13.3
13
68
21
89
38
9
0
51
1.40
23043--23116
14
5.1
14
76
12
69
37
8
0
54
1.30
23057--23205
30
5.2
29
68
21
91
38
10
0
50
1.37
22995--23204
87
2.4
88
87
4
298
38
10
0
51
1.39
23659--23698
21
2.0
21
85
5
55
15
10
25
50
1.74

Tables:   1

The End!