Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023038.1 Corchorus olitorius cultivar O-4 contig23071, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11323

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7680--7739
22
2.8
22
75
12
61
20
3
16
60
1.50
9349--9395
11
4.7
10
80
17
53
40
6
21
31
1.78
9360--9395
19
1.9
18
88
5
54
41
2
22
33
1.68
10481--10513
13
2.5
13
95
0
57
72
0
3
24
0.98
10578--10764
15
12.5
15
69
11
116
65
1
7
26
1.26
10526--10782
11
23.3
11
70
18
137
63
1
9
25
1.33
10567--10775
19
11.1
19
70
19
127
65
0
7
26
1.26
10524--10765
31
8.1
31
70
19
158
63
1
9
25
1.34
10574--10764
4
50.0
4
68
13
109
65
1
7
26
1.25
10607--10784
18
10.1
19
71
16
116
63
0
9
26
1.29
10695--10852
30
5.1
30
69
17
101
68
0
9
22
1.18

Tables:   1

The End!