Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023040.1 Corchorus olitorius cultivar O-4 contig23073, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3726

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
616--645
13
2.3
13
94
0
51
73
0
3
23
0.98
714--900
15
12.5
15
69
11
116
65
1
7
26
1.26
703--918
11
20.1
11
72
17
136
64
0
7
26
1.26
703--911
19
11.1
19
70
19
127
65
0
7
26
1.26
703--901
31
6.7
31
72
20
158
65
1
7
26
1.26
710--900
4
50.0
4
68
13
109
65
1
7
26
1.25
743--920
18
10.1
19
71
16
116
63
0
9
26
1.29
703--982
15
18.4
15
65
21
95
66
0
7
24
1.23
880--992
27
4.1
27
69
23
76
70
0
7
21
1.12

Tables:   1

The End!