Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023043.1 Corchorus olitorius cultivar O-4 contig23076, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31334

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13--276
30
8.8
30
94
0
420
29
20
18
31
1.96
1507--1545
2
20.5
2
89
10
64
51
0
0
48
1.00
1502--1538
17
2.2
17
95
0
65
54
2
0
43
1.14
1507--1545
19
2.1
19
95
0
69
51
0
0
48
1.00
5229--5267
2
20.0
2
89
5
62
46
0
2
51
1.14
19660--19699
21
1.9
21
89
0
62
15
30
15
40
1.87
20218--20274
22
2.6
22
91
0
96
15
24
33
26
1.95

Tables:   1

The End!