Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023044.1 Corchorus olitorius cultivar O-4 contig23077, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32998

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1954--2010
27
2.1
27
90
3
89
40
28
14
17
1.88
11668--11710
22
2.0
22
90
0
68
23
6
30
39
1.81
12080--12160
29
2.8
29
85
10
112
55
2
2
39
1.26
12086--12160
31
2.6
29
87
6
98
56
2
2
38
1.28
20766--20828
31
2.0
32
87
9
94
52
7
17
22
1.70
22942--23004
30
2.1
30
84
0
81
44
9
11
34
1.73
25749--25786
19
2.0
19
100
0
76
31
0
15
52
1.43

Tables:   1

The End!