Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023051.1 Corchorus olitorius cultivar O-4 contig23084, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23819

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8633--8692
30
2.0
30
100
0
120
33
26
6
33
1.83
8876--8937
26
2.4
26
97
2
117
33
16
3
46
1.63
22752--22810
16
3.7
16
95
0
109
6
13
37
42
1.71
22800--22870
6
12.2
6
81
11
67
0
22
47
29
1.51
22800--22870
23
3.0
23
87
2
97
0
22
47
29
1.51
22813--22872
29
2.1
28
93
3
102
0
23
50
26
1.50
22821--22878
29
2.0
29
93
0
98
3
24
50
22
1.65
23074--23114
14
2.7
16
78
21
52
43
9
2
43
1.50

Tables:   1

The End!