Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023053.1 Corchorus olitorius cultivar O-4 contig23086, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26822

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
569--635
35
1.9
35
93
3
118
20
16
8
53
1.69
739--791
28
2.0
25
82
17
63
39
1
1
56
1.21
871--908
6
6.5
6
87
6
60
0
18
55
26
1.43
917--955
16
2.4
16
95
0
69
7
12
41
38
1.72
9709--9749
16
2.6
16
88
0
55
58
26
7
7
1.51
11874--11985
55
2.0
55
100
0
224
26
16
28
28
1.97
12279--12320
21
2.0
21
90
0
66
35
14
16
33
1.89
19541--19642
49
2.0
51
88
5
154
40
10
13
35
1.80
26214--26352
72
1.9
72
92
0
233
33
15
27
23
1.95

Tables:   1

The End!