Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023054.1 Corchorus olitorius cultivar O-4 contig23087, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30217

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1102--1134
10
3.0
11
86
13
50
42
0
3
54
1.15
1130--1170
21
1.9
22
85
5
57
41
2
0
56
1.13
1102--1182
23
3.6
23
74
14
78
44
1
1
53
1.16
10794--10825
5
6.4
5
100
0
64
59
0
40
0
0.97
18116--18177
29
2.1
30
87
3
90
40
16
6
37
1.74
22794--22820
13
2.1
13
100
0
54
55
29
0
14
1.40
29747--29782
19
1.9
18
88
5
54
41
8
22
27
1.82
29735--29794
30
2.0
30
83
6
77
41
8
18
31
1.80

Tables:   1

The End!