Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023061.1 Corchorus olitorius cultivar O-4 contig23094, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17590

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4647--4686
20
2.0
20
100
0
80
40
0
20
40
1.52
4821--4856
14
2.5
15
90
4
56
44
11
0
44
1.39
6359--6527
75
2.3
75
82
2
196
39
13
26
21
1.90
6746--6890
75
1.9
75
87
2
211
39
16
26
17
1.91
14803--14954
76
2.0
76
82
7
184
17
29
28
24
1.97
15884--15933
26
1.9
26
87
0
73
14
20
12
54
1.71

Tables:   1

The End!