Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023070.1 Corchorus olitorius cultivar O-4 contig23103, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36028

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1941--2189
122
2.0
123
93
1
430
50
1
9
38
1.42
6715--6753
19
2.1
19
85
9
53
43
12
12
30
1.81
14788--14900
59
1.9
59
85
1
156
30
16
11
40
1.84
16841--16926
35
2.4
34
81
12
86
27
26
6
38
1.82
26254--26337
30
2.8
30
92
0
132
27
23
14
34
1.94
27230--27255
5
5.2
5
100
0
52
61
19
19
0
1.35
32087--32357
128
2.1
129
87
4
388
27
19
21
30
1.98

Tables:   1

The End!