Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023073.1 Corchorus olitorius cultivar O-4 contig23106, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12450

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25--97
32
2.2
33
87
2
103
16
39
35
8
1.78
937--969
15
2.2
15
89
10
50
36
0
0
63
0.95
2162--2191
15
2.1
15
93
6
53
66
0
0
33
0.92
6902--6940
19
2.1
19
90
9
62
7
0
89
2
0.56
6906--6940
16
2.1
17
94
5
63
5
0
91
2
0.50
6902--6940
10
4.0
10
86
6
53
7
0
89
2
0.56
10645--10703
25
2.2
27
85
14
95
23
10
8
57
1.59
10651--10707
25
2.3
25
96
0
105
22
12
7
57
1.58

Tables:   1

The End!