Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023079.1 Corchorus olitorius cultivar O-4 contig23112, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18753

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2384--2545
60
2.7
61
87
2
238
36
15
19
29
1.92
2590--2748
60
2.7
60
82
2
185
30
16
15
37
1.90
6652--6677
3
8.7
3
100
0
52
34
0
0
65
0.93
7671--7726
28
2.0
28
100
0
112
28
21
14
35
1.92
14023--14103
37
2.2
37
95
2
146
37
19
19
23
1.95
16209--16273
28
2.4
28
84
7
89
46
3
4
46
1.39
16321--16357
10
3.8
10
92
3
58
48
0
16
35
1.46
17530--17562
2
16.5
2
93
0
57
48
0
3
48
1.17

Tables:   1

The End!