Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023111.1 Corchorus olitorius cultivar O-4 contig23144, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23601

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
765--809
23
1.9
24
95
4
83
44
8
8
37
1.67
2972--3031
31
1.9
31
89
0
93
20
23
16
40
1.91
3028--3099
31
2.3
31
78
4
83
19
23
25
31
1.98
4199--4243
23
2.0
24
82
8
58
31
20
4
44
1.71
7262--7305
23
1.9
23
95
0
79
40
2
20
36
1.65
8955--9116
65
2.5
65
78
6
164
31
16
10
41
1.82
9031--9371
22
15.4
22
69
13
139
35
13
10
40
1.79
9204--9325
46
2.7
44
81
9
140
38
12
9
40
1.74
9254--9357
43
2.3
43
83
4
118
35
15
9
39
1.80

Tables:   1

The End!