Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023144.1 Corchorus olitorius cultivar O-4 contig23177, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18614

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
661--727
26
2.6
26
92
2
109
43
4
25
26
1.74
6341--6378
2
19.0
2
94
0
67
50
2
0
47
1.15
6382--6421
16
2.6
16
92
4
64
47
0
20
32
1.50
7207--7236
15
2.1
15
93
6
53
66
6
13
13
1.43
10631--10660
2
15.0
2
100
0
60
50
0
0
50
1.00
15672--15710
19
2.1
18
90
4
60
46
0
23
30
1.53

Tables:   1

The End!