Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023152.1 Corchorus olitorius cultivar O-4 contig23185, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18665

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
677--760
30
2.8
29
83
3
105
50
3
3
42
1.37
1318--1352
11
3.2
11
83
0
52
77
17
5
0
0.96
1424--1466
2
21.0
2
85
4
59
48
0
6
44
1.29
5890--6434
272
2.0
273
95
1
995
44
11
19
24
1.84
17639--17670
2
17.0
2
87
12
50
50
0
0
50
1.00
18300--18351
25
2.1
25
82
7
61
53
1
3
40
1.30

Tables:   1

The End!