Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023155.1 Corchorus olitorius cultivar O-4 contig23188, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10023

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
192--223
2
16.0
2
100
0
64
50
0
0
50
1.00
5124--5168
21
2.1
21
83
0
54
31
28
22
17
1.97
6431--6457
13
2.1
13
100
0
54
25
7
7
59
1.51
6435--6502
34
2.1
33
84
13
88
20
10
10
58
1.60
7985--8015
11
2.8
11
95
0
53
45
22
19
12
1.84
8149--8192
18
2.4
18
88
0
61
22
18
0
59
1.38
8179--8206
3
9.3
3
100
0
56
32
0
0
67
0.91

Tables:   1

The End!