Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023158.1 Corchorus olitorius cultivar O-4 contig23191, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17258

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
770--825
2
31.0
2
80
20
70
50
0
0
50
1.00
1665--1972
69
4.6
68
80
9
355
21
17
14
46
1.84
2000--2033
17
2.1
15
89
10
50
61
5
0
32
1.20
2752--2948
98
2.0
98
98
0
385
49
21
8
20
1.75
4260--4288
2
14.5
2
100
0
58
51
0
0
48
1.00
6611--6672
30
2.0
32
93
6
110
40
24
9
25
1.85
6707--6734
2
14.0
2
100
0
56
50
0
0
50
1.00
8658--8707
24
2.1
24
85
7
66
10
8
46
36
1.67
9268--9331
22
3.1
22
63
21
57
59
12
3
25
1.48
9268--9347
39
2.1
38
81
11
92
60
10
6
23
1.52
9412--9506
45
2.1
45
83
11
115
48
13
33
4
1.62

Tables:   1

The End!