Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023159.1 Corchorus olitorius cultivar O-4 contig23192, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6069

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2367--2631
110
2.5
105
86
7
372
40
8
9
41
1.68
4596--4663
21
3.3
20
77
6
73
45
14
11
27
1.80
4989--5044
23
2.6
21
72
10
58
23
14
26
35
1.93
4747--5102
87
4.1
87
84
1
444
25
14
19
40
1.89
5433--5482
2
26.5
2
84
11
70
52
0
0
48
1.00
5433--5481
11
4.4
11
92
2
71
53
0
0
46
1.00

Tables:   1

The End!